Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC091305.1-201ENST00000479476 895 ntBASIC32.72■■■□□ 2.83
COL16A1Q07092 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL16A1Q07092 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL16A1Q07092 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL16A1Q07092 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.72■■■□□ 2.83
COL16A1Q07092 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
COL16A1Q07092 IKBKGP1-201ENST00000612193 1073 ntBASIC32.71■■■□□ 2.83
COL16A1Q07092 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
COL16A1Q07092 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC32.7■■■□□ 2.83
COL16A1Q07092 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC32.69■■■□□ 2.82
COL16A1Q07092 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
COL16A1Q07092 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
COL16A1Q07092 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.69■■■□□ 2.82
COL16A1Q07092 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.68■■■□□ 2.82
COL16A1Q07092 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC32.68■■■□□ 2.82
COL16A1Q07092 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.67■■■□□ 2.82
COL16A1Q07092 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.67■■■□□ 2.82
COL16A1Q07092 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC32.67■■■□□ 2.82
COL16A1Q07092 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
COL16A1Q07092 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL16A1Q07092 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.66■■■□□ 2.82
COL16A1Q07092 SRD5A1P1-201ENST00000442297 786 ntBASIC32.66■■■□□ 2.82
COL16A1Q07092 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
COL16A1Q07092 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
COL16A1Q07092 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL16A1Q07092 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.65■■■□□ 2.82
COL16A1Q07092 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL16A1Q07092 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.64■■■□□ 2.82
COL16A1Q07092 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.64■■■□□ 2.82
COL16A1Q07092 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.64■■■□□ 2.82
COL16A1Q07092 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.64■■■□□ 2.82
COL16A1Q07092 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
COL16A1Q07092 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.62■■■□□ 2.81
COL16A1Q07092 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
COL16A1Q07092 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
COL16A1Q07092 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
COL16A1Q07092 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC32.62■■■□□ 2.81
COL16A1Q07092 SF1-220ENST00000626028 704 ntTSL 2 BASIC32.62■■■□□ 2.81
COL16A1Q07092 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
COL16A1Q07092 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC32.61■■■□□ 2.81
COL16A1Q07092 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC32.61■■■□□ 2.81
COL16A1Q07092 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL16A1Q07092 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL16A1Q07092 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL16A1Q07092 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL16A1Q07092 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL16A1Q07092 CA15P2-201ENST00000611168 834 ntBASIC32.6■■■□□ 2.81
COL16A1Q07092 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
COL16A1Q07092 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.59■■■□□ 2.81
COL16A1Q07092 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC32.59■■■□□ 2.81
COL16A1Q07092 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
COL16A1Q07092 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.57■■■□□ 2.8
COL16A1Q07092 GATM-206ENST00000558336 1522 ntTSL 2 BASIC32.57■■■□□ 2.8
COL16A1Q07092 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC32.57■■■□□ 2.8
COL16A1Q07092 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
COL16A1Q07092 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
COL16A1Q07092 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
COL16A1Q07092 MAG-206ENST00000597035 542 ntTSL 4 BASIC32.57■■■□□ 2.8
COL16A1Q07092 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.57■■■□□ 2.8
COL16A1Q07092 AC092437.1-201ENST00000624794 1048 ntBASIC32.56■■■□□ 2.8
COL16A1Q07092 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.56■■■□□ 2.8
COL16A1Q07092 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
COL16A1Q07092 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
COL16A1Q07092 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.55■■■□□ 2.8
COL16A1Q07092 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL16A1Q07092 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
COL16A1Q07092 PTMA-205ENST00000410064 814 ntTSL 2 BASIC32.55■■■□□ 2.8
COL16A1Q07092 MIR4767-201ENST00000582827 78 ntBASIC32.55■■■□□ 2.8
COL16A1Q07092 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL16A1Q07092 MIR6722-201ENST00000617286 78 ntBASIC32.54■■■□□ 2.8
COL16A1Q07092 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
COL16A1Q07092 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.54■■■□□ 2.8
COL16A1Q07092 RASA4CP-201ENST00000424092 1398 ntBASIC32.54■■■□□ 2.8
COL16A1Q07092 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
COL16A1Q07092 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC32.53■■■□□ 2.8
COL16A1Q07092 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.53■■■□□ 2.8
COL16A1Q07092 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
COL16A1Q07092 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
COL16A1Q07092 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
COL16A1Q07092 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL16A1Q07092 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC32.52■■■□□ 2.8
COL16A1Q07092 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.52■■■□□ 2.8
COL16A1Q07092 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
COL16A1Q07092 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
COL16A1Q07092 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.51■■■□□ 2.79
COL16A1Q07092 AC027682.1-201ENST00000562846 899 ntBASIC32.51■■■□□ 2.79
COL16A1Q07092 AL449106.1-201ENST00000608517 1980 ntBASIC32.5■■■□□ 2.79
COL16A1Q07092 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
COL16A1Q07092 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.5■■■□□ 2.79
COL16A1Q07092 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
COL16A1Q07092 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
COL16A1Q07092 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.48■■■□□ 2.79
COL16A1Q07092 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COL16A1Q07092 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL16A1Q07092 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL16A1Q07092 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.48■■■□□ 2.79
COL16A1Q07092 KRT18P5-201ENST00000436075 1291 ntBASIC32.48■■■□□ 2.79
COL16A1Q07092 AL137784.2-201ENST00000607332 1000 ntBASIC32.48■■■□□ 2.79
COL16A1Q07092 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
COL16A1Q07092 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms