Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX6-1P78426 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-1P78426 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-1P78426 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-1P78426 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-1P78426 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX6-1P78426 KRT125P-201ENST00000546827 989 ntBASIC20.65■□□□□ 0.9
NKX6-1P78426 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-1P78426 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX6-1P78426 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-1P78426 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-1P78426 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-1P78426 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-1P78426 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-1P78426 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.64■□□□□ 0.9
NKX6-1P78426 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-1P78426 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.64■□□□□ 0.89
NKX6-1P78426 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-1P78426 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-1P78426 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-1P78426 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-1P78426 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-1P78426 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NKX6-1P78426 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.63■□□□□ 0.89
NKX6-1P78426 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-1P78426 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-1P78426 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
NKX6-1P78426 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NKX6-1P78426 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NKX6-1P78426 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-1P78426 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-1P78426 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-1P78426 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-1P78426 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.62■□□□□ 0.89
NKX6-1P78426 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.62■□□□□ 0.89
NKX6-1P78426 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.62■□□□□ 0.89
NKX6-1P78426 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.61■□□□□ 0.89
NKX6-1P78426 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX6-1P78426 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.61■□□□□ 0.89
NKX6-1P78426 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NKX6-1P78426 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKX6-1P78426 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-1P78426 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX6-1P78426 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NKX6-1P78426 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-1P78426 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-1P78426 BX664725.1-201ENST00000438252 379 ntBASIC20.6■□□□□ 0.89
NKX6-1P78426 LONRF2P2-201ENST00000439212 571 ntBASIC20.6■□□□□ 0.89
NKX6-1P78426 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.6■□□□□ 0.89
NKX6-1P78426 MIR4787-201ENST00000607364 84 ntBASIC20.6■□□□□ 0.89
NKX6-1P78426 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-1P78426 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX6-1P78426 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.6■□□□□ 0.89
NKX6-1P78426 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-1P78426 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX6-1P78426 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX6-1P78426 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-1P78426 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.59■□□□□ 0.89
NKX6-1P78426 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-1P78426 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-1P78426 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NKX6-1P78426 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-1P78426 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.58■□□□□ 0.89
NKX6-1P78426 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.58■□□□□ 0.89
NKX6-1P78426 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.58■□□□□ 0.89
NKX6-1P78426 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.58■□□□□ 0.88
NKX6-1P78426 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX6-1P78426 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.58■□□□□ 0.88
NKX6-1P78426 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX6-1P78426 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX6-1P78426 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.57■□□□□ 0.88
NKX6-1P78426 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-1P78426 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NKX6-1P78426 ERN1-208ENST00000606895 2068 ntBASIC20.57■□□□□ 0.88
NKX6-1P78426 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-1P78426 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NKX6-1P78426 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NKX6-1P78426 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.57■□□□□ 0.88
NKX6-1P78426 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-1P78426 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-1P78426 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX6-1P78426 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-1P78426 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.56■□□□□ 0.88
NKX6-1P78426 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NKX6-1P78426 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.56■□□□□ 0.88
NKX6-1P78426 AC092803.2-201ENST00000564287 1899 ntBASIC20.56■□□□□ 0.88
NKX6-1P78426 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-1P78426 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms