Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RPP38P78345 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 TSPY13P-201ENST00000338964 914 ntBASIC22.19■■□□□ 1.14
RPP38P78345 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.19■■□□□ 1.14
RPP38P78345 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RPP38P78345 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RPP38P78345 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.19■■□□□ 1.14
RPP38P78345 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP38P78345 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RPP38P78345 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP38P78345 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP38P78345 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
RPP38P78345 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.18■■□□□ 1.14
RPP38P78345 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RPP38P78345 ATP5G2P3-201ENST00000429083 425 ntBASIC22.18■■□□□ 1.14
RPP38P78345 MIR6765-201ENST00000614092 87 ntBASIC22.18■■□□□ 1.14
RPP38P78345 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP38P78345 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RPP38P78345 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP38P78345 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.17■■□□□ 1.14
RPP38P78345 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP38P78345 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPP38P78345 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.16■■□□□ 1.14
RPP38P78345 AC004987.1-201ENST00000428627 508 ntBASIC22.16■■□□□ 1.14
RPP38P78345 DUX4L9-201ENST00000449051 1259 ntBASIC22.16■■□□□ 1.14
RPP38P78345 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.16■■□□□ 1.14
RPP38P78345 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RPP38P78345 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPP38P78345 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.16■■□□□ 1.14
RPP38P78345 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.16■■□□□ 1.14
RPP38P78345 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPP38P78345 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.15■■□□□ 1.14
RPP38P78345 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.15■■□□□ 1.14
RPP38P78345 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP38P78345 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.15■■□□□ 1.14
RPP38P78345 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.15■■□□□ 1.14
RPP38P78345 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RPP38P78345 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPP38P78345 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RPP38P78345 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RPP38P78345 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.14■■□□□ 1.13
RPP38P78345 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPP38P78345 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.13■■□□□ 1.13
RPP38P78345 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPP38P78345 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPP38P78345 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.13■■□□□ 1.13
RPP38P78345 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPP38P78345 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.13■■□□□ 1.13
RPP38P78345 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPP38P78345 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPP38P78345 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.12■■□□□ 1.13
RPP38P78345 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPP38P78345 AL033527.3-201ENST00000566366 1196 ntBASIC22.12■■□□□ 1.13
RPP38P78345 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPP38P78345 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPP38P78345 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RPP38P78345 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
RPP38P78345 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.11■■□□□ 1.13
RPP38P78345 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPP38P78345 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.1■■□□□ 1.13
RPP38P78345 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.1■■□□□ 1.13
RPP38P78345 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.1■■□□□ 1.13
RPP38P78345 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPP38P78345 DUX4L18-201ENST00000553347 1267 ntBASIC22.1■■□□□ 1.13
RPP38P78345 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
RPP38P78345 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPP38P78345 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.1■■□□□ 1.13
RPP38P78345 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPP38P78345 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPP38P78345 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPP38P78345 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
RPP38P78345 AC096887.2-201ENST00000623443 1957 ntBASIC22.09■■□□□ 1.13
RPP38P78345 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RPP38P78345 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
RPP38P78345 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPP38P78345 SPCS2P3-201ENST00000500401 656 ntBASIC22.09■■□□□ 1.13
RPP38P78345 AC139795.1-202ENST00000500444 432 ntBASIC22.09■■□□□ 1.13
RPP38P78345 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.09■■□□□ 1.13
RPP38P78345 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPP38P78345 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms