Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC25A1P53007 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SLC25A1P53007 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC25A1P53007 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC25A1P53007 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC25A1P53007 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC25A1P53007 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC25A1P53007 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC25A1P53007 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SLC25A1P53007 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC25A1P53007 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC25A1P53007 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC25A1P53007 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC25A1P53007 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC25A1P53007 KRT18P10-201ENST00000388836 1287 ntBASIC20.98■□□□□ 0.95
SLC25A1P53007 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLC25A1P53007 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC25A1P53007 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC25A1P53007 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC25A1P53007 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC25A1P53007 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC25A1P53007 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC25A1P53007 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC25A1P53007 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC25A1P53007 RAP2CP1-202ENST00000605179 643 ntBASIC20.97■□□□□ 0.95
SLC25A1P53007 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC25A1P53007 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC25A1P53007 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC25A1P53007 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
SLC25A1P53007 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC25A1P53007 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC25A1P53007 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC25A1P53007 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SLC25A1P53007 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SLC25A1P53007 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A1P53007 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A1P53007 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC25A1P53007 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A1P53007 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A1P53007 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SLC25A1P53007 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC25A1P53007 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC25A1P53007 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC25A1P53007 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A1P53007 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A1P53007 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A1P53007 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A1P53007 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC25A1P53007 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC25A1P53007 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A1P53007 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A1P53007 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A1P53007 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SLC25A1P53007 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A1P53007 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A1P53007 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC25A1P53007 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC25A1P53007 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A1P53007 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC25A1P53007 AC026202.3-201ENST00000600805 1127 ntBASIC20.91■□□□□ 0.94
SLC25A1P53007 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC25A1P53007 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC25A1P53007 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A1P53007 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC25A1P53007 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC25A1P53007 MIR4449-201ENST00000578365 66 ntBASIC20.9■□□□□ 0.94
SLC25A1P53007 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC25A1P53007 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC25A1P53007 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC25A1P53007 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC25A1P53007 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC25A1P53007 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC25A1P53007 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC25A1P53007 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC25A1P53007 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC25A1P53007 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A1P53007 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A1P53007 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC25A1P53007 GPX1-201ENST00000419349 1106 ntBASIC20.88■□□□□ 0.93
SLC25A1P53007 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A1P53007 FOXO3B-201ENST00000395675 1928 ntBASIC20.88■□□□□ 0.93
SLC25A1P53007 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A1P53007 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A1P53007 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A1P53007 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A1P53007 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms