Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HCFC1P51610 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC1P51610 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.81■□□□□ 0.92
HCFC1P51610 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC1P51610 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HCFC1P51610 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC1P51610 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC1P51610 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC1P51610 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HCFC1P51610 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC1P51610 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC1P51610 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HCFC1P51610 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC1P51610 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCFC1P51610 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
HCFC1P51610 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HCFC1P51610 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.79■□□□□ 0.92
HCFC1P51610 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.79■□□□□ 0.92
HCFC1P51610 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCFC1P51610 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HCFC1P51610 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.78■□□□□ 0.92
HCFC1P51610 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1P51610 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.78■□□□□ 0.92
HCFC1P51610 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.78■□□□□ 0.92
HCFC1P51610 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCFC1P51610 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1P51610 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.77■□□□□ 0.92
HCFC1P51610 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.77■□□□□ 0.92
HCFC1P51610 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1P51610 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HCFC1P51610 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCFC1P51610 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.77■□□□□ 0.91
HCFC1P51610 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1P51610 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HCFC1P51610 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1P51610 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCFC1P51610 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HCFC1P51610 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCFC1P51610 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HCFC1P51610 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
HCFC1P51610 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.75■□□□□ 0.91
HCFC1P51610 AL121749.1-202ENST00000609313 2153 ntBASIC20.75■□□□□ 0.91
HCFC1P51610 AC096631.2-201ENST00000436136 790 ntBASIC20.75■□□□□ 0.91
HCFC1P51610 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1P51610 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1P51610 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
HCFC1P51610 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1P51610 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1P51610 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC1P51610 SUDS3P1-201ENST00000505831 966 ntBASIC20.73■□□□□ 0.91
HCFC1P51610 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1P51610 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1P51610 AF131216.4-201ENST00000638924 1588 ntBASIC20.73■□□□□ 0.91
HCFC1P51610 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.73■□□□□ 0.91
HCFC1P51610 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1P51610 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1P51610 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HCFC1P51610 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1P51610 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1P51610 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1P51610 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1P51610 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.71■□□□□ 0.91
HCFC1P51610 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1P51610 AP004609.3-201ENST00000610705 1884 ntBASIC20.71■□□□□ 0.91
HCFC1P51610 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1P51610 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1P51610 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HCFC1P51610 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.71■□□□□ 0.91
HCFC1P51610 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.71■□□□□ 0.91
HCFC1P51610 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.71■□□□□ 0.91
HCFC1P51610 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC1P51610 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1P51610 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC1P51610 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1P51610 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HCFC1P51610 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1P51610 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1P51610 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC1P51610 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HCFC1P51610 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1P51610 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1P51610 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HCFC1P51610 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1P51610 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.68■□□□□ 0.9
HCFC1P51610 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.68■□□□□ 0.9
HCFC1P51610 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.68■□□□□ 0.9
HCFC1P51610 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1P51610 SNX5-217ENST00000606557 1087 ntBASIC20.68■□□□□ 0.9
HCFC1P51610 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HCFC1P51610 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HCFC1P51610 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.68■□□□□ 0.9
HCFC1P51610 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HCFC1P51610 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1P51610 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms