Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.69■■□□□ 1.06
HTR3AP46098 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HTR3AP46098 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3AP46098 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3AP46098 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.68■■□□□ 1.06
HTR3AP46098 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3AP46098 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.68■■□□□ 1.06
HTR3AP46098 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
HTR3AP46098 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3AP46098 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3AP46098 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR3AP46098 LINC00543-201ENST00000567234 1845 ntBASIC21.66■■□□□ 1.06
HTR3AP46098 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR3AP46098 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR3AP46098 ABHD17AP5-201ENST00000580133 923 ntBASIC21.66■■□□□ 1.06
HTR3AP46098 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HTR3AP46098 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR3AP46098 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HTR3AP46098 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.65■■□□□ 1.06
HTR3AP46098 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HTR3AP46098 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HTR3AP46098 AL592293.1-201ENST00000502889 1188 ntBASIC21.65■■□□□ 1.06
HTR3AP46098 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.65■■□□□ 1.06
HTR3AP46098 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR3AP46098 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR3AP46098 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HTR3AP46098 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.64■■□□□ 1.06
HTR3AP46098 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HTR3AP46098 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3AP46098 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTR3AP46098 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTR3AP46098 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HTR3AP46098 AC018755.3-202ENST00000596210 929 ntBASIC21.63■■□□□ 1.05
HTR3AP46098 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTR3AP46098 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTR3AP46098 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HTR3AP46098 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
HTR3AP46098 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3AP46098 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HTR3AP46098 U85056.1-201ENST00000616429 682 ntBASIC21.62■■□□□ 1.05
HTR3AP46098 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.62■■□□□ 1.05
HTR3AP46098 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.62■■□□□ 1.05
HTR3AP46098 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3AP46098 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3AP46098 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3AP46098 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3AP46098 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.61■■□□□ 1.05
HTR3AP46098 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.61■■□□□ 1.05
HTR3AP46098 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HTR3AP46098 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HTR3AP46098 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.6■■□□□ 1.05
HTR3AP46098 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HTR3AP46098 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3AP46098 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.59■■□□□ 1.05
HTR3AP46098 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HTR3AP46098 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HTR3AP46098 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
HTR3AP46098 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.58■■□□□ 1.05
HTR3AP46098 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
HTR3AP46098 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.58■■□□□ 1.05
HTR3AP46098 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HTR3AP46098 NTF6A-201ENST00000591175 560 ntBASIC21.58■■□□□ 1.05
HTR3AP46098 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HTR3AP46098 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
HTR3AP46098 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3AP46098 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.57■■□□□ 1.04
HTR3AP46098 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3AP46098 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3AP46098 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HTR3AP46098 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.57■■□□□ 1.04
HTR3AP46098 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HTR3AP46098 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HTR3AP46098 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.57■■□□□ 1.04
HTR3AP46098 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3AP46098 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HTR3AP46098 MIR6765-201ENST00000614092 87 ntBASIC21.56■■□□□ 1.04
HTR3AP46098 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3AP46098 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HTR3AP46098 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HTR3AP46098 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3AP46098 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3AP46098 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HTR3AP46098 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3AP46098 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3AP46098 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms