Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.71■■□□□ 1.07
PEPDP12955 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
PEPDP12955 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.71■■□□□ 1.07
PEPDP12955 BHLHE23-202ENST00000612929 1109 ntBASIC21.71■■□□□ 1.07
PEPDP12955 AC074183.2-201ENST00000623112 922 ntBASIC21.71■■□□□ 1.07
PEPDP12955 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEPDP12955 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.71■■□□□ 1.07
PEPDP12955 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PEPDP12955 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.7■■□□□ 1.06
PEPDP12955 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.7■■□□□ 1.06
PEPDP12955 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.7■■□□□ 1.06
PEPDP12955 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEPDP12955 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEPDP12955 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.69■■□□□ 1.06
PEPDP12955 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
PEPDP12955 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEPDP12955 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.69■■□□□ 1.06
PEPDP12955 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PEPDP12955 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEPDP12955 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEPDP12955 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
PEPDP12955 AC022211.4-201ENST00000625094 2161 ntBASIC21.68■■□□□ 1.06
PEPDP12955 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PEPDP12955 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.68■■□□□ 1.06
PEPDP12955 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEPDP12955 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.68■■□□□ 1.06
PEPDP12955 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.68■■□□□ 1.06
PEPDP12955 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PEPDP12955 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PEPDP12955 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.68■■□□□ 1.06
PEPDP12955 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PEPDP12955 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.68■■□□□ 1.06
PEPDP12955 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.67■■□□□ 1.06
PEPDP12955 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEPDP12955 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEPDP12955 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PEPDP12955 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PEPDP12955 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PEPDP12955 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
PEPDP12955 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PEPDP12955 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PEPDP12955 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.65■■□□□ 1.06
PEPDP12955 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PEPDP12955 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PEPDP12955 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PEPDP12955 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PEPDP12955 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
PEPDP12955 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PEPDP12955 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PEPDP12955 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
PEPDP12955 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PEPDP12955 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PEPDP12955 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PEPDP12955 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
PEPDP12955 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.63■■□□□ 1.05
PEPDP12955 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PEPDP12955 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.63■■□□□ 1.05
PEPDP12955 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PEPDP12955 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PEPDP12955 RPS2P7-201ENST00000447334 885 ntBASIC21.63■■□□□ 1.05
PEPDP12955 AC087393.1-201ENST00000582896 145 ntBASIC21.63■■□□□ 1.05
PEPDP12955 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PEPDP12955 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.63■■□□□ 1.05
PEPDP12955 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PEPDP12955 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PEPDP12955 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PEPDP12955 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PEPDP12955 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.62■■□□□ 1.05
PEPDP12955 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PEPDP12955 AC138932.3-201ENST00000567634 1902 ntBASIC21.61■■□□□ 1.05
PEPDP12955 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
PEPDP12955 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEPDP12955 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEPDP12955 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PEPDP12955 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.61■■□□□ 1.05
PEPDP12955 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEPDP12955 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.6■■□□□ 1.05
PEPDP12955 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.6■■□□□ 1.05
PEPDP12955 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEPDP12955 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEPDP12955 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEPDP12955 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms