Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.29■■□□□ 1
HMGN1P05114 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 AC025884.2-201ENST00000553429 711 ntBASIC21.29■■□□□ 1
HMGN1P05114 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.29■■□□□ 1
HMGN1P05114 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.29■■□□□ 1
HMGN1P05114 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
HMGN1P05114 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGN1P05114 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HMGN1P05114 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.28■■□□□ 1
HMGN1P05114 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.28■■□□□ 1
HMGN1P05114 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HMGN1P05114 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.28■■□□□ 1
HMGN1P05114 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGN1P05114 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGN1P05114 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.27■■□□□ 1
HMGN1P05114 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.27■■□□□ 1
HMGN1P05114 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.27■■□□□ 1
HMGN1P05114 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HMGN1P05114 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGN1P05114 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGN1P05114 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGN1P05114 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGN1P05114 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.27■□□□□ 0.99
HMGN1P05114 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGN1P05114 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HMGN1P05114 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGN1P05114 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGN1P05114 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HMGN1P05114 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGN1P05114 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.25■□□□□ 0.99
HMGN1P05114 AL157400.5-201ENST00000507624 621 ntBASIC21.25■□□□□ 0.99
HMGN1P05114 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGN1P05114 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HMGN1P05114 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGN1P05114 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGN1P05114 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGN1P05114 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HMGN1P05114 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HMGN1P05114 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 ABHD17AP4-201ENST00000411545 909 ntBASIC21.24■□□□□ 0.99
HMGN1P05114 MIR6089-201ENST00000616698 64 ntBASIC21.24■□□□□ 0.99
HMGN1P05114 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.24■□□□□ 0.99
HMGN1P05114 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGN1P05114 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGN1P05114 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGN1P05114 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGN1P05114 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HMGN1P05114 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGN1P05114 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HMGN1P05114 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGN1P05114 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGN1P05114 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGN1P05114 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGN1P05114 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGN1P05114 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGN1P05114 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HMGN1P05114 SMPD5-203ENST00000639008 1464 ntBASIC21.22■□□□□ 0.99
HMGN1P05114 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGN1P05114 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGN1P05114 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGN1P05114 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGN1P05114 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HMGN1P05114 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGN1P05114 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGN1P05114 AC016575.1-201ENST00000607026 382 ntBASIC21.21■□□□□ 0.99
HMGN1P05114 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGN1P05114 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGN1P05114 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.2■□□□□ 0.98
HMGN1P05114 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGN1P05114 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGN1P05114 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGN1P05114 AC060814.1-201ENST00000554326 538 ntBASIC21.19■□□□□ 0.98
HMGN1P05114 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HMGN1P05114 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGN1P05114 AC012676.1-201ENST00000574705 1949 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms