Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.61■■□□□ 1.05
P04436 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
P04436 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.6■■□□□ 1.05
P04436 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.6■■□□□ 1.05
P04436 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.6■■□□□ 1.05
P04436 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P04436 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.59■■□□□ 1.05
P04436 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
P04436 BX664725.1-201ENST00000438252 379 ntBASIC21.59■■□□□ 1.05
P04436 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.59■■□□□ 1.05
P04436 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.59■■□□□ 1.05
P04436 Z92544.1-202ENST00000571933 1220 ntBASIC21.59■■□□□ 1.05
P04436 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P04436 AC011551.1-201ENST00000614101 683 ntBASIC21.59■■□□□ 1.05
P04436 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
P04436 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.59■■□□□ 1.05
P04436 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
P04436 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.58■■□□□ 1.05
P04436 AC239859.2-201ENST00000444165 318 ntBASIC21.58■■□□□ 1.05
P04436 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
P04436 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.58■■□□□ 1.05
P04436 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.58■■□□□ 1.05
P04436 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
P04436 DUSP8P4-201ENST00000399538 1761 ntBASIC21.58■■□□□ 1.04
P04436 AC091060.1-201ENST00000623524 1766 ntBASIC21.58■■□□□ 1.04
P04436 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.57■■□□□ 1.04
P04436 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
P04436 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.57■■□□□ 1.04
P04436 KRT125P-201ENST00000546827 989 ntBASIC21.57■■□□□ 1.04
P04436 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 AC145676.1-201ENST00000514988 2004 ntBASIC21.56■■□□□ 1.04
P04436 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
P04436 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.56■■□□□ 1.04
P04436 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
P04436 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.56■■□□□ 1.04
P04436 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
P04436 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.55■■□□□ 1.04
P04436 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
P04436 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
P04436 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.54■■□□□ 1.04
P04436 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
P04436 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.54■■□□□ 1.04
P04436 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.53■■□□□ 1.04
P04436 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.53■■□□□ 1.04
P04436 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
P04436 MIR4281-201ENST00000580852 62 ntBASIC21.53■■□□□ 1.04
P04436 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
P04436 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
P04436 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
P04436 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P04436 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 GUSBP5-201ENST00000418136 578 ntBASIC21.51■■□□□ 1.03
P04436 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.51■■□□□ 1.03
P04436 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.51■■□□□ 1.03
P04436 AC137630.3-201ENST00000607245 391 ntBASIC21.51■■□□□ 1.03
P04436 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.51■■□□□ 1.03
P04436 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
P04436 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P04436 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P04436 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms