Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.61■■□□□ 1.05
P04436 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
P04436 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04436 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.6■■□□□ 1.05
P04436 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.6■■□□□ 1.05
P04436 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.6■■□□□ 1.05
P04436 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P04436 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.59■■□□□ 1.05
P04436 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
P04436 BX664725.1-201ENST00000438252 379 ntBASIC21.59■■□□□ 1.05
P04436 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.59■■□□□ 1.05
P04436 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.59■■□□□ 1.05
P04436 Z92544.1-202ENST00000571933 1220 ntBASIC21.59■■□□□ 1.05
P04436 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P04436 AC011551.1-201ENST00000614101 683 ntBASIC21.59■■□□□ 1.05
P04436 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
P04436 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.59■■□□□ 1.05
P04436 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
P04436 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.58■■□□□ 1.05
P04436 AC239859.2-201ENST00000444165 318 ntBASIC21.58■■□□□ 1.05
P04436 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
P04436 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.58■■□□□ 1.05
P04436 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.58■■□□□ 1.05
P04436 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
P04436 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
P04436 DUSP8P4-201ENST00000399538 1761 ntBASIC21.58■■□□□ 1.04
P04436 AC091060.1-201ENST00000623524 1766 ntBASIC21.58■■□□□ 1.04
P04436 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.57■■□□□ 1.04
P04436 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
P04436 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.57■■□□□ 1.04
P04436 KRT125P-201ENST00000546827 989 ntBASIC21.57■■□□□ 1.04
P04436 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04436 AC145676.1-201ENST00000514988 2004 ntBASIC21.56■■□□□ 1.04
P04436 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
P04436 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.56■■□□□ 1.04
P04436 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
P04436 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.56■■□□□ 1.04
P04436 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04436 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
P04436 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.55■■□□□ 1.04
P04436 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
P04436 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
P04436 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04436 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.54■■□□□ 1.04
P04436 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
P04436 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04436 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.54■■□□□ 1.04
P04436 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.53■■□□□ 1.04
P04436 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.53■■□□□ 1.04
P04436 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
P04436 MIR4281-201ENST00000580852 62 ntBASIC21.53■■□□□ 1.04
P04436 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
P04436 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04436 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
P04436 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04436 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
P04436 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P04436 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 GUSBP5-201ENST00000418136 578 ntBASIC21.51■■□□□ 1.03
P04436 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.51■■□□□ 1.03
P04436 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.51■■□□□ 1.03
P04436 AC137630.3-201ENST00000607245 391 ntBASIC21.51■■□□□ 1.03
P04436 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.51■■□□□ 1.03
P04436 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
P04436 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
P04436 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P04436 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P04436 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms