Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAF1P04049 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAF1P04049 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
RAF1P04049 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.23■□□□□ 0.99
RAF1P04049 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.23■□□□□ 0.99
RAF1P04049 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAF1P04049 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RAF1P04049 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.22■□□□□ 0.99
RAF1P04049 AC018755.3-202ENST00000596210 929 ntBASIC21.22■□□□□ 0.99
RAF1P04049 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.22■□□□□ 0.99
RAF1P04049 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.22■□□□□ 0.99
RAF1P04049 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.22■□□□□ 0.99
RAF1P04049 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAF1P04049 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.22■□□□□ 0.99
RAF1P04049 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAF1P04049 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAF1P04049 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.21■□□□□ 0.99
RAF1P04049 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAF1P04049 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.21■□□□□ 0.99
RAF1P04049 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAF1P04049 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAF1P04049 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAF1P04049 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAF1P04049 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAF1P04049 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAF1P04049 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
RAF1P04049 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.2■□□□□ 0.98
RAF1P04049 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.2■□□□□ 0.98
RAF1P04049 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAF1P04049 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.2■□□□□ 0.98
RAF1P04049 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAF1P04049 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RAF1P04049 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAF1P04049 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.19■□□□□ 0.98
RAF1P04049 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.19■□□□□ 0.98
RAF1P04049 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAF1P04049 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAF1P04049 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAF1P04049 AC133561.1-201ENST00000568600 2415 ntBASIC21.19■□□□□ 0.98
RAF1P04049 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RAF1P04049 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAF1P04049 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAF1P04049 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.18■□□□□ 0.98
RAF1P04049 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RAF1P04049 AC103834.1-201ENST00000520383 144 ntBASIC21.18■□□□□ 0.98
RAF1P04049 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
RAF1P04049 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.18■□□□□ 0.98
RAF1P04049 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.18■□□□□ 0.98
RAF1P04049 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAF1P04049 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
RAF1P04049 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAF1P04049 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 GUSBP5-201ENST00000418136 578 ntBASIC21.17■□□□□ 0.98
RAF1P04049 THA1P-201ENST00000590384 1145 ntBASIC21.17■□□□□ 0.98
RAF1P04049 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAF1P04049 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.17■□□□□ 0.98
RAF1P04049 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RAF1P04049 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
RAF1P04049 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAF1P04049 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.16■□□□□ 0.98
RAF1P04049 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RAF1P04049 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAF1P04049 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAF1P04049 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAF1P04049 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAF1P04049 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.15■□□□□ 0.98
RAF1P04049 MIR4508-201ENST00000584178 70 ntBASIC21.15■□□□□ 0.98
RAF1P04049 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.15■□□□□ 0.98
RAF1P04049 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.15■□□□□ 0.98
RAF1P04049 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAF1P04049 AC022211.4-201ENST00000625094 2161 ntBASIC21.13■□□□□ 0.97
RAF1P04049 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAF1P04049 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAF1P04049 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms