Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-CO2P00403 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-CO2P00403 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MT-CO2P00403 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO2P00403 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
MT-CO2P00403 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO2P00403 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-CO2P00403 AC138932.3-201ENST00000567634 1902 ntBASIC18.87■□□□□ 0.61
MT-CO2P00403 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-CO2P00403 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO2P00403 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-CO2P00403 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO2P00403 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.85■□□□□ 0.61
MT-CO2P00403 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO2P00403 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO2P00403 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO2P00403 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MT-CO2P00403 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO2P00403 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO2P00403 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.84■□□□□ 0.61
MT-CO2P00403 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
MT-CO2P00403 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.84■□□□□ 0.61
MT-CO2P00403 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 AL157400.5-201ENST00000507624 621 ntBASIC18.84■□□□□ 0.61
MT-CO2P00403 AC060814.1-201ENST00000554326 538 ntBASIC18.84■□□□□ 0.61
MT-CO2P00403 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.84■□□□□ 0.61
MT-CO2P00403 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
MT-CO2P00403 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MT-CO2P00403 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
MT-CO2P00403 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MT-CO2P00403 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.83■□□□□ 0.6
MT-CO2P00403 MIR639-201ENST00000384974 98 ntBASIC18.83■□□□□ 0.6
MT-CO2P00403 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.83■□□□□ 0.6
MT-CO2P00403 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.83■□□□□ 0.6
MT-CO2P00403 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-CO2P00403 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
MT-CO2P00403 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-CO2P00403 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MT-CO2P00403 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.83■□□□□ 0.6
MT-CO2P00403 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-CO2P00403 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MT-CO2P00403 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MT-CO2P00403 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-CO2P00403 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-CO2P00403 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-CO2P00403 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 AC012676.1-201ENST00000574705 1949 ntBASIC18.81■□□□□ 0.6
MT-CO2P00403 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.81■□□□□ 0.6
MT-CO2P00403 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-CO2P00403 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-CO2P00403 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-CO2P00403 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-CO2P00403 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MT-CO2P00403 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-CO2P00403 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-CO2P00403 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-CO2P00403 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-CO2P00403 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
MT-CO2P00403 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
MT-CO2P00403 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-CO2P00403 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-CO2P00403 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms