Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DHFRP00374 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.3■□□□□ 0.84
DHFRP00374 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DHFRP00374 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHFRP00374 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DHFRP00374 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.3■□□□□ 0.84
DHFRP00374 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DHFRP00374 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHFRP00374 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DHFRP00374 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DHFRP00374 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.29■□□□□ 0.84
DHFRP00374 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.29■□□□□ 0.84
DHFRP00374 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DHFRP00374 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.28■□□□□ 0.84
DHFRP00374 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DHFRP00374 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.28■□□□□ 0.84
DHFRP00374 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DHFRP00374 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DHFRP00374 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DHFRP00374 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DHFRP00374 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DHFRP00374 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DHFRP00374 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DHFRP00374 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DHFRP00374 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DHFRP00374 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DHFRP00374 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 AC044849.2-201ENST00000606596 710 ntBASIC20.26■□□□□ 0.83
DHFRP00374 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.26■□□□□ 0.83
DHFRP00374 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DHFRP00374 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
DHFRP00374 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
DHFRP00374 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
DHFRP00374 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
DHFRP00374 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DHFRP00374 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.25■□□□□ 0.83
DHFRP00374 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DHFRP00374 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DHFRP00374 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
DHFRP00374 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.24■□□□□ 0.83
DHFRP00374 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DHFRP00374 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DHFRP00374 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DHFRP00374 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DHFRP00374 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
DHFRP00374 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DHFRP00374 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.23■□□□□ 0.83
DHFRP00374 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DHFRP00374 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DHFRP00374 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.23■□□□□ 0.83
DHFRP00374 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
DHFRP00374 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DHFRP00374 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DHFRP00374 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DHFRP00374 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DHFRP00374 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DHFRP00374 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DHFRP00374 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.22■□□□□ 0.83
DHFRP00374 C9orf163-202ENST00000624034 2573 ntBASIC20.22■□□□□ 0.83
DHFRP00374 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
DHFRP00374 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DHFRP00374 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DHFRP00374 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.21■□□□□ 0.83
DHFRP00374 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
DHFRP00374 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
DHFRP00374 AC087741.3-201ENST00000624270 1347 ntBASIC20.21■□□□□ 0.83
DHFRP00374 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DHFRP00374 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DHFRP00374 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
DHFRP00374 AL162393.1-201ENST00000437852 946 ntBASIC20.2■□□□□ 0.82
DHFRP00374 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.2■□□□□ 0.82
DHFRP00374 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DHFRP00374 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DHFRP00374 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DHFRP00374 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DHFRP00374 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
DHFRP00374 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DHFRP00374 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.19■□□□□ 0.82
DHFRP00374 MIR6090-201ENST00000622481 60 ntBASIC20.19■□□□□ 0.82
DHFRP00374 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DHFRP00374 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DHFRP00374 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DHFRP00374 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DHFRP00374 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DHFRP00374 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DHFRP00374 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.18■□□□□ 0.82
DHFRP00374 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.18■□□□□ 0.82
DHFRP00374 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms