Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AC135983.2-203ENST00000454486 1613 ntBASIC21.29■■□□□ 1
CLPXO76031 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPXO76031 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPXO76031 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLPXO76031 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CLPXO76031 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.28■■□□□ 1
CLPXO76031 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CLPXO76031 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLPXO76031 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.28■■□□□ 1
CLPXO76031 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLPXO76031 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLPXO76031 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLPXO76031 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.27■□□□□ 0.99
CLPXO76031 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLPXO76031 WHAMMP2-203ENST00000563942 1603 ntBASIC21.26■□□□□ 0.99
CLPXO76031 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPXO76031 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPXO76031 EP400NL-214ENST00000641289 2402 ntBASIC21.26■□□□□ 0.99
CLPXO76031 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPXO76031 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPXO76031 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLPXO76031 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPXO76031 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.25■□□□□ 0.99
CLPXO76031 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.25■□□□□ 0.99
CLPXO76031 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.25■□□□□ 0.99
CLPXO76031 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.25■□□□□ 0.99
CLPXO76031 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLPXO76031 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
CLPXO76031 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.24■□□□□ 0.99
CLPXO76031 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPXO76031 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.24■□□□□ 0.99
CLPXO76031 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLPXO76031 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
CLPXO76031 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.23■□□□□ 0.99
CLPXO76031 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.23■□□□□ 0.99
CLPXO76031 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.23■□□□□ 0.99
CLPXO76031 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.23■□□□□ 0.99
CLPXO76031 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLPXO76031 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
CLPXO76031 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLPXO76031 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPXO76031 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLPXO76031 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLPXO76031 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLPXO76031 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 DUX4L29-201ENST00000425409 679 ntBASIC21.22■□□□□ 0.99
CLPXO76031 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLPXO76031 ABCB10P4-201ENST00000566803 2184 ntBASIC21.21■□□□□ 0.99
CLPXO76031 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.21■□□□□ 0.99
CLPXO76031 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.21■□□□□ 0.99
CLPXO76031 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPXO76031 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.21■□□□□ 0.99
CLPXO76031 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLPXO76031 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLPXO76031 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLPXO76031 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLPXO76031 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLPXO76031 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.2■□□□□ 0.98
CLPXO76031 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.2■□□□□ 0.98
CLPXO76031 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLPXO76031 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
CLPXO76031 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms