Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH7O60245 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH7O60245 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH7O60245 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH7O60245 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.52■■□□□ 1.19
PCDH7O60245 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH7O60245 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH7O60245 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDH7O60245 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH7O60245 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH7O60245 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH7O60245 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH7O60245 AL592293.1-201ENST00000502889 1188 ntBASIC22.5■■□□□ 1.19
PCDH7O60245 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDH7O60245 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH7O60245 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH7O60245 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH7O60245 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH7O60245 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH7O60245 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH7O60245 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH7O60245 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH7O60245 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDH7O60245 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH7O60245 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH7O60245 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH7O60245 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PCDH7O60245 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH7O60245 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH7O60245 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH7O60245 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH7O60245 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDH7O60245 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH7O60245 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDH7O60245 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH7O60245 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH7O60245 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH7O60245 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH7O60245 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
PCDH7O60245 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH7O60245 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH7O60245 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH7O60245 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH7O60245 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH7O60245 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH7O60245 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDH7O60245 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDH7O60245 AC018755.3-202ENST00000596210 929 ntBASIC22.44■■□□□ 1.18
PCDH7O60245 MIR6089-201ENST00000616698 64 ntBASIC22.44■■□□□ 1.18
PCDH7O60245 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH7O60245 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 FOXO3B-201ENST00000395675 1928 ntBASIC22.43■■□□□ 1.18
PCDH7O60245 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH7O60245 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 SPCS2P3-201ENST00000500401 656 ntBASIC22.43■■□□□ 1.18
PCDH7O60245 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 LINC01124-201ENST00000409786 2117 ntBASIC22.43■■□□□ 1.18
PCDH7O60245 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
PCDH7O60245 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH7O60245 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH7O60245 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH7O60245 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDH7O60245 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDH7O60245 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH7O60245 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH7O60245 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH7O60245 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH7O60245 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH7O60245 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH7O60245 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDH7O60245 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH7O60245 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH7O60245 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH7O60245 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH7O60245 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH7O60245 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH7O60245 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH7O60245 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH7O60245 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH7O60245 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PCDH7O60245 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH7O60245 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH7O60245 U85056.1-201ENST00000616429 682 ntBASIC22.4■■□□□ 1.18
PCDH7O60245 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH7O60245 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH7O60245 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH7O60245 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDH7O60245 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH7O60245 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH7O60245 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH7O60245 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH7O60245 RPS2P7-201ENST00000447334 885 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms