Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NCK2O43639 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NCK2O43639 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.01■■□□□ 1.75
NCK2O43639 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.01■■□□□ 1.75
NCK2O43639 WHAMMP3-201ENST00000611636 1609 ntBASIC26.01■■□□□ 1.75
NCK2O43639 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
NCK2O43639 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NCK2O43639 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NCK2O43639 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26■■□□□ 1.75
NCK2O43639 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26■■□□□ 1.75
NCK2O43639 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26■■□□□ 1.75
NCK2O43639 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NCK2O43639 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26■■□□□ 1.75
NCK2O43639 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NCK2O43639 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.99■■□□□ 1.75
NCK2O43639 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
NCK2O43639 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NCK2O43639 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.99■■□□□ 1.75
NCK2O43639 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NCK2O43639 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
NCK2O43639 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCK2O43639 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.98■■□□□ 1.75
NCK2O43639 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCK2O43639 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCK2O43639 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.98■■□□□ 1.75
NCK2O43639 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCK2O43639 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
NCK2O43639 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCK2O43639 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
NCK2O43639 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NCK2O43639 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NCK2O43639 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.97■■□□□ 1.75
NCK2O43639 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.97■■□□□ 1.75
NCK2O43639 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.97■■□□□ 1.75
NCK2O43639 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCK2O43639 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NCK2O43639 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.96■■□□□ 1.75
NCK2O43639 AC093323.1-202ENST00000635031 2045 ntBASIC25.96■■□□□ 1.75
NCK2O43639 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCK2O43639 AL359504.2-201ENST00000605506 1601 ntBASIC25.96■■□□□ 1.75
NCK2O43639 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
NCK2O43639 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
NCK2O43639 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NCK2O43639 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.95■■□□□ 1.74
NCK2O43639 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.95■■□□□ 1.74
NCK2O43639 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.95■■□□□ 1.74
NCK2O43639 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NCK2O43639 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
NCK2O43639 ERN1-208ENST00000606895 2068 ntBASIC25.94■■□□□ 1.74
NCK2O43639 BX664725.1-201ENST00000438252 379 ntBASIC25.94■■□□□ 1.74
NCK2O43639 LONRF2P2-201ENST00000439212 571 ntBASIC25.94■■□□□ 1.74
NCK2O43639 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
NCK2O43639 RPS2P7-201ENST00000447334 885 ntBASIC25.93■■□□□ 1.74
NCK2O43639 MIR4787-201ENST00000607364 84 ntBASIC25.93■■□□□ 1.74
NCK2O43639 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
NCK2O43639 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NCK2O43639 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NCK2O43639 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NCK2O43639 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
NCK2O43639 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NCK2O43639 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.93■■□□□ 1.74
NCK2O43639 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NCK2O43639 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
NCK2O43639 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
NCK2O43639 AC022616.5-201ENST00000518796 181 ntBASIC25.92■■□□□ 1.74
NCK2O43639 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.92■■□□□ 1.74
NCK2O43639 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NCK2O43639 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NCK2O43639 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.91■■□□□ 1.74
NCK2O43639 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.91■■□□□ 1.74
NCK2O43639 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.91■■□□□ 1.74
NCK2O43639 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NCK2O43639 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NCK2O43639 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NCK2O43639 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.9■■□□□ 1.74
NCK2O43639 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NCK2O43639 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NCK2O43639 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
NCK2O43639 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.89■■□□□ 1.74
NCK2O43639 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
NCK2O43639 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
NCK2O43639 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
NCK2O43639 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
NCK2O43639 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
NCK2O43639 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
NCK2O43639 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NCK2O43639 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.88■■□□□ 1.73
NCK2O43639 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NCK2O43639 MIR638-201ENST00000385237 100 ntBASIC25.88■■□□□ 1.73
NCK2O43639 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
NCK2O43639 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.88■■□□□ 1.73
NCK2O43639 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms