Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PPM1DO15297 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPM1DO15297 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1DO15297 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.03■■□□□ 1.28
PPM1DO15297 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1DO15297 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PPM1DO15297 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1DO15297 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1DO15297 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1DO15297 BX664725.1-201ENST00000438252 379 ntBASIC23.03■■□□□ 1.28
PPM1DO15297 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.03■■□□□ 1.28
PPM1DO15297 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1DO15297 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1DO15297 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PPM1DO15297 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.02■■□□□ 1.28
PPM1DO15297 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PPM1DO15297 AC131212.1-201ENST00000613771 668 ntBASIC23.02■■□□□ 1.28
PPM1DO15297 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.02■■□□□ 1.28
PPM1DO15297 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1DO15297 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.02■■□□□ 1.28
PPM1DO15297 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.01■■□□□ 1.27
PPM1DO15297 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.01■■□□□ 1.27
PPM1DO15297 AL356441.2-201ENST00000443009 864 ntBASIC23.01■■□□□ 1.27
PPM1DO15297 KRT125P-201ENST00000546827 989 ntBASIC23.01■■□□□ 1.27
PPM1DO15297 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 AC137630.3-201ENST00000607245 391 ntBASIC23.01■■□□□ 1.27
PPM1DO15297 MIR4787-201ENST00000607364 84 ntBASIC23.01■■□□□ 1.27
PPM1DO15297 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1DO15297 AC145676.1-201ENST00000514988 2004 ntBASIC23■■□□□ 1.27
PPM1DO15297 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23■■□□□ 1.27
PPM1DO15297 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23■■□□□ 1.27
PPM1DO15297 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PPM1DO15297 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23■■□□□ 1.27
PPM1DO15297 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.99■■□□□ 1.27
PPM1DO15297 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1DO15297 AC096887.2-201ENST00000623443 1957 ntBASIC22.98■■□□□ 1.27
PPM1DO15297 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.98■■□□□ 1.27
PPM1DO15297 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.98■■□□□ 1.27
PPM1DO15297 DUSP8P4-201ENST00000399538 1761 ntBASIC22.98■■□□□ 1.27
PPM1DO15297 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PPM1DO15297 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.98■■□□□ 1.27
PPM1DO15297 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.97■■□□□ 1.27
PPM1DO15297 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.97■■□□□ 1.27
PPM1DO15297 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPM1DO15297 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPM1DO15297 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.97■■□□□ 1.27
PPM1DO15297 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPM1DO15297 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PPM1DO15297 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PPM1DO15297 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 MIR4281-201ENST00000580852 62 ntBASIC22.96■■□□□ 1.27
PPM1DO15297 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
PPM1DO15297 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PPM1DO15297 AC010501.1-201ENST00000606270 1962 ntBASIC22.96■■□□□ 1.27
PPM1DO15297 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PPM1DO15297 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
PPM1DO15297 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.95■■□□□ 1.26
PPM1DO15297 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 AC021242.3-201ENST00000607598 1377 ntBASIC22.94■■□□□ 1.26
PPM1DO15297 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PPM1DO15297 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PPM1DO15297 FOXO3B-201ENST00000395675 1928 ntBASIC22.93■■□□□ 1.26
PPM1DO15297 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.93■■□□□ 1.26
PPM1DO15297 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PPM1DO15297 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PPM1DO15297 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PPM1DO15297 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PPM1DO15297 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.92■■□□□ 1.26
PPM1DO15297 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PPM1DO15297 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.92■■□□□ 1.26
PPM1DO15297 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PPM1DO15297 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
PPM1DO15297 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PPM1DO15297 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.92■■□□□ 1.26
PPM1DO15297 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms