Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA9B4DS77 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHISA9B4DS77 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA9B4DS77 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA9B4DS77 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA9B4DS77 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA9B4DS77 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.32■□□□□ 0.84
SHISA9B4DS77 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.32■□□□□ 0.84
SHISA9B4DS77 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.32■□□□□ 0.84
SHISA9B4DS77 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA9B4DS77 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.31■□□□□ 0.84
SHISA9B4DS77 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA9B4DS77 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.31■□□□□ 0.84
SHISA9B4DS77 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SHISA9B4DS77 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA9B4DS77 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA9B4DS77 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.3■□□□□ 0.84
SHISA9B4DS77 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA9B4DS77 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.3■□□□□ 0.84
SHISA9B4DS77 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHISA9B4DS77 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHISA9B4DS77 AC097639.1-201ENST00000565519 1891 ntBASIC20.3■□□□□ 0.84
SHISA9B4DS77 AC010501.1-201ENST00000606270 1962 ntBASIC20.3■□□□□ 0.84
SHISA9B4DS77 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA9B4DS77 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA9B4DS77 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.29■□□□□ 0.84
SHISA9B4DS77 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.29■□□□□ 0.84
SHISA9B4DS77 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA9B4DS77 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.29■□□□□ 0.84
SHISA9B4DS77 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.29■□□□□ 0.84
SHISA9B4DS77 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA9B4DS77 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA9B4DS77 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA9B4DS77 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.28■□□□□ 0.84
SHISA9B4DS77 KRT16P3-201ENST00000439127 1283 ntBASIC20.28■□□□□ 0.84
SHISA9B4DS77 TSPY9P-201ENST00000440215 945 ntBASIC20.28■□□□□ 0.84
SHISA9B4DS77 TSPY11P-201ENST00000442607 1045 ntBASIC20.28■□□□□ 0.84
SHISA9B4DS77 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.28■□□□□ 0.84
SHISA9B4DS77 AC092028.1-203ENST00000608262 953 ntBASIC20.28■□□□□ 0.84
SHISA9B4DS77 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHISA9B4DS77 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA9B4DS77 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.28■□□□□ 0.84
SHISA9B4DS77 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA9B4DS77 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA9B4DS77 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA9B4DS77 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA9B4DS77 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SHISA9B4DS77 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.27■□□□□ 0.84
SHISA9B4DS77 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.27■□□□□ 0.84
SHISA9B4DS77 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHISA9B4DS77 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.26■□□□□ 0.83
SHISA9B4DS77 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.26■□□□□ 0.83
SHISA9B4DS77 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.26■□□□□ 0.83
SHISA9B4DS77 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SHISA9B4DS77 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA9B4DS77 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA9B4DS77 AC092803.2-201ENST00000564287 1899 ntBASIC20.25■□□□□ 0.83
SHISA9B4DS77 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA9B4DS77 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.25■□□□□ 0.83
SHISA9B4DS77 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.25■□□□□ 0.83
SHISA9B4DS77 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHISA9B4DS77 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA9B4DS77 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHISA9B4DS77 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA9B4DS77 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA9B4DS77 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHISA9B4DS77 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHISA9B4DS77 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.24■□□□□ 0.83
SHISA9B4DS77 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.24■□□□□ 0.83
SHISA9B4DS77 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA9B4DS77 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA9B4DS77 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.23■□□□□ 0.83
SHISA9B4DS77 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHISA9B4DS77 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHISA9B4DS77 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.23■□□□□ 0.83
SHISA9B4DS77 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHISA9B4DS77 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SHISA9B4DS77 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
SHISA9B4DS77 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHISA9B4DS77 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.22■□□□□ 0.83
SHISA9B4DS77 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.22■□□□□ 0.83
SHISA9B4DS77 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.22■□□□□ 0.83
SHISA9B4DS77 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHISA9B4DS77 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHISA9B4DS77 AF131216.4-201ENST00000638924 1588 ntBASIC20.21■□□□□ 0.83
SHISA9B4DS77 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.21■□□□□ 0.83
SHISA9B4DS77 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.21■□□□□ 0.83
SHISA9B4DS77 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms