Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFPL4AA6NLU0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFPL4AA6NLU0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 AC093536.1-201ENST00000569153 554 ntBASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.26■□□□□ 0.83
RFPL4AA6NLU0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 HSD17B1P1-201ENST00000590052 955 ntBASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFPL4AA6NLU0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 AC022211.4-201ENST00000625094 2161 ntBASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.24■□□□□ 0.83
RFPL4AA6NLU0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFPL4AA6NLU0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFPL4AA6NLU0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RFPL4AA6NLU0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL4AA6NLU0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
RFPL4AA6NLU0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL4AA6NLU0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 AC096887.2-201ENST00000623443 1957 ntBASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.21■□□□□ 0.83
RFPL4AA6NLU0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RFPL4AA6NLU0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 RARRES2P2-201ENST00000394842 485 ntBASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL4AA6NLU0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 AC026202.3-201ENST00000600805 1127 ntBASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 CLDN5-201ENST00000403084 2357 ntBASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.18■□□□□ 0.82
RFPL4AA6NLU0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFPL4AA6NLU0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFPL4AA6NLU0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFPL4AA6NLU0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFPL4AA6NLU0 RAP2CP1-202ENST00000605179 643 ntBASIC20.16■□□□□ 0.82
RFPL4AA6NLU0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFPL4AA6NLU0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RFPL4AA6NLU0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFPL4AA6NLU0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFPL4AA6NLU0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFPL4AA6NLU0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms