Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AF131216.4-201ENST00000638924 1588 ntBASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 AC004448.1-201ENST00000458332 883 ntBASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.12■■■□□ 2.09
TMEM88BA6NKF7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TMEM88BA6NKF7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM88BA6NKF7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMEM88BA6NKF7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.1■■■□□ 2.09
TMEM88BA6NKF7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMEM88BA6NKF7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM88BA6NKF7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.09■■■□□ 2.09
TMEM88BA6NKF7 IKBKGP1-201ENST00000612193 1073 ntBASIC28.09■■■□□ 2.09
TMEM88BA6NKF7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 CA15P2-201ENST00000611168 834 ntBASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 MIR6722-201ENST00000617286 78 ntBASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMEM88BA6NKF7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
TMEM88BA6NKF7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 DUX4L19-201ENST00000557448 1267 ntBASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TMEM88BA6NKF7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TMEM88BA6NKF7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TMEM88BA6NKF7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TMEM88BA6NKF7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.06■■■□□ 2.08
TMEM88BA6NKF7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 RASA4CP-201ENST00000424092 1398 ntBASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.05■■■□□ 2.08
TMEM88BA6NKF7 AC022517.1-201ENST00000592429 346 ntBASIC28.04■■■□□ 2.08
TMEM88BA6NKF7 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.04■■■□□ 2.08
TMEM88BA6NKF7 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.04■■■□□ 2.08
TMEM88BA6NKF7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TMEM88BA6NKF7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
TMEM88BA6NKF7 IRS3P-201ENST00000223076 1006 ntBASIC28.03■■■□□ 2.08
TMEM88BA6NKF7 AL137784.2-201ENST00000607332 1000 ntBASIC28.03■■■□□ 2.08
TMEM88BA6NKF7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
TMEM88BA6NKF7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM88BA6NKF7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM88BA6NKF7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEM88BA6NKF7 SNX5-217ENST00000606557 1087 ntBASIC28.01■■■□□ 2.07
TMEM88BA6NKF7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.01■■■□□ 2.07
TMEM88BA6NKF7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TMEM88BA6NKF7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28■■■□□ 2.07
TMEM88BA6NKF7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28■■■□□ 2.07
TMEM88BA6NKF7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 ID1-201ENST00000376105 1233 ntBASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 MIR4767-201ENST00000582827 78 ntBASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM88BA6NKF7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TMEM88BA6NKF7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
TMEM88BA6NKF7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
TMEM88BA6NKF7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.97■■■□□ 2.07
TMEM88BA6NKF7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
TMEM88BA6NKF7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.95■■■□□ 2.07
TMEM88BA6NKF7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.95■■■□□ 2.06
TMEM88BA6NKF7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.95■■■□□ 2.06
TMEM88BA6NKF7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.94■■■□□ 2.06
TMEM88BA6NKF7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
TMEM88BA6NKF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TMEM88BA6NKF7 AC027682.1-201ENST00000562846 899 ntBASIC27.94■■■□□ 2.06
TMEM88BA6NKF7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
TMEM88BA6NKF7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 AC034268.1-201ENST00000441047 882 ntBASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms