Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV5-4A0A0C4DH59 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 AC074183.2-201ENST00000623112 922 ntBASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-4A0A0C4DH59 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV5-4A0A0C4DH59 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.39■■□□□ 1.34
TRBV5-4A0A0C4DH59 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV5-4A0A0C4DH59 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
TRBV5-4A0A0C4DH59 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
TRBV5-4A0A0C4DH59 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TRBV5-4A0A0C4DH59 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV5-4A0A0C4DH59 MIR6089-201ENST00000616698 64 ntBASIC23.39■■□□□ 1.33
TRBV5-4A0A0C4DH59 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TRBV5-4A0A0C4DH59 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-4A0A0C4DH59 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 AC138932.3-201ENST00000567634 1902 ntBASIC23.37■■□□□ 1.33
TRBV5-4A0A0C4DH59 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 PVT1_1.1-201ENST00000615125 194 ntBASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-4A0A0C4DH59 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 AL592295.1-201ENST00000400984 884 ntBASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-4A0A0C4DH59 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV5-4A0A0C4DH59 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRBV5-4A0A0C4DH59 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV5-4A0A0C4DH59 BHLHE23-202ENST00000612929 1109 ntBASIC23.34■■□□□ 1.33
TRBV5-4A0A0C4DH59 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-4A0A0C4DH59 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRBV5-4A0A0C4DH59 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 AC010980.1-201ENST00000587192 1142 ntBASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-4A0A0C4DH59 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-4A0A0C4DH59 AP003733.4-201ENST00000623785 1697 ntBASIC23.3■■□□□ 1.32
TRBV5-4A0A0C4DH59 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-4A0A0C4DH59 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.3■■□□□ 1.32
TRBV5-4A0A0C4DH59 AC022616.5-201ENST00000518796 181 ntBASIC23.3■■□□□ 1.32
TRBV5-4A0A0C4DH59 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms