Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 AC103834.1-201ENST00000520383 144 ntBASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV25A0A0B4J276 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 KRT18P24-201ENST00000344739 1156 ntBASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 AC011551.1-201ENST00000614101 683 ntBASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV25A0A0B4J276 AC135731.1-201ENST00000569415 2548 ntBASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 KRT8P33-201ENST00000508125 1423 ntBASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 RARRES2P1-201ENST00000474487 481 ntBASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV25A0A0B4J276 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV25A0A0B4J276 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV25A0A0B4J276 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 THA1P-201ENST00000590384 1145 ntBASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 AL031848.2-201ENST00000607670 837 ntBASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV25A0A0B4J276 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 AC103724.3-201ENST00000564481 992 ntBASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.69■□□□□ 0.42
TRAV25A0A0B4J276 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV25A0A0B4J276 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV25A0A0B4J276 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 AC120024.1-201ENST00000562672 995 ntBASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV25A0A0B4J276 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 AC090877.2-201ENST00000558441 1738 ntBASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms