Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.47■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 SLC6A10P-202ENST00000431994 2058 ntBASIC21.47■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 PVT1_1.1-201ENST00000615125 194 ntBASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 LONRF2P2-201ENST00000439212 571 ntBASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FOXO3B-201ENST00000395675 1928 ntBASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 KRT8P33-201ENST00000508125 1423 ntBASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 AC103834.1-201ENST00000520383 144 ntBASIC21.42■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 AC019171.1-201ENST00000601251 1056 ntBASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 AC022211.4-201ENST00000625094 2161 ntBASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TNFSF12-TNFSF13A0A0A6YY99 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 AL451085.2-201ENST00000605085 799 ntBASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 AC142381.3-201ENST00000568208 1670 ntBASIC21.38■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 AL592295.1-201ENST00000400984 884 ntBASIC21.38■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFSF12-TNFSF13A0A0A6YY99 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms