Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 AC233723.2-201ENST00000623798 2106 ntBASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.81■□□□□ 0.12
TRBV20-1A0A075B6N2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV20-1A0A075B6N2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV20-1A0A075B6N2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV20-1A0A075B6N2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.77■□□□□ 0.12
TRBV20-1A0A075B6N2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV20-1A0A075B6N2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 AC142472.1-201ENST00000612013 1741 ntBASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV20-1A0A075B6N2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV20-1A0A075B6N2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV20-1A0A075B6N2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV20-1A0A075B6N2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV20-1A0A075B6N2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV20-1A0A075B6N2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV20-1A0A075B6N2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms