Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGB6Q9Y5F9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC126177.1-201ENST00000547829 2218 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 MIR770-201ENST00000390219 98 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PMS2P4-201ENST00000412466 1052 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC092474.2-201ENST00000424288 719 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC092364.2-202ENST00000597012 1073 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC093028.1-201ENST00000622998 982 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AP001350.2-201ENST00000625104 1094 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 LINC00628-201ENST00000628516 1289 ntBASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB6Q9Y5F9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PCDHGB6Q9Y5F9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC092364.2-201ENST00000596710 2692 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AL592309.1-201ENST00000443127 649 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC069335.1-201ENST00000489972 472 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC079140.1-201ENST00000508039 487 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 KRT8P48-201ENST00000515599 1220 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC243562.1-201ENST00000560672 389 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AL135744.1-201ENST00000565098 629 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms