Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 RPL13AP23-201ENST00000480739 586 ntBASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 PRYP6-201ENST00000514804 343 ntBASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 AP002472.1-201ENST00000577490 586 ntBASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA7Q9UN72 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AC134407.2-201ENST00000625089 1978 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 TPM4P1-201ENST00000436100 807 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AC074386.1-202ENST00000463561 864 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AL138918.1-201ENST00000568306 659 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 AL513190.1-201ENST00000621254 727 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 PMS2P7-201ENST00000506558 1336 ntBASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHA7Q9UN72 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA7Q9UN72 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms