Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 RNA5SP410-201ENST00000516285 106 ntBASIC16.53■□□□□ 0.24
EBF1Q9UH73 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 AC104794.3-201ENST00000566840 1248 ntBASIC16.53■□□□□ 0.24
EBF1Q9UH73 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
EBF1Q9UH73 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
EBF1Q9UH73 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 DGCR5-201ENST00000399539 862 ntBASIC16.52■□□□□ 0.24
EBF1Q9UH73 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 AC011495.1-201ENST00000498085 584 ntBASIC16.52■□□□□ 0.24
EBF1Q9UH73 AC093004.1-201ENST00000508850 424 ntBASIC16.52■□□□□ 0.24
EBF1Q9UH73 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 AL162274.1-201ENST00000617191 1098 ntBASIC16.52■□□□□ 0.24
EBF1Q9UH73 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EBF1Q9UH73 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.52■□□□□ 0.24
EBF1Q9UH73 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.52■□□□□ 0.23
EBF1Q9UH73 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 KRT8P39-201ENST00000396270 1433 ntBASIC16.52■□□□□ 0.23
EBF1Q9UH73 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.52■□□□□ 0.23
EBF1Q9UH73 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EBF1Q9UH73 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
EBF1Q9UH73 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EBF1Q9UH73 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 INE1-201ENST00000456273 945 ntBASIC16.51■□□□□ 0.23
EBF1Q9UH73 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 AC106886.1-201ENST00000568660 600 ntBASIC16.51■□□□□ 0.23
EBF1Q9UH73 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.51■□□□□ 0.23
EBF1Q9UH73 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms