Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 HLA-H-201ENST00000383620 1096 ntBASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 HLA-J-202ENST00000469281 1241 ntBASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC097493.3-201ENST00000509725 367 ntBASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC069120.2-201ENST00000524091 540 ntBASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 MIR3197-201ENST00000582241 73 ntBASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 FAM220BP-201ENST00000377689 816 ntBASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 RNA5SP421-201ENST00000516864 134 ntBASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 IGHV3-42-201ENST00000520410 361 ntBASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP2Q9UDT6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 BASP1P1-201ENST00000430708 665 ntBASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 AC093724.1-201ENST00000448659 1027 ntBASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 AC022188.1-201ENST00000620960 1664 ntBASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP2Q9UDT6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIP2Q9UDT6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms