Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 IGHV3-62-201ENST00000520057 340 ntBASIC15.22■□□□□ 0.03
CNIH4Q9P003 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 AC016027.1-202ENST00000607927 1699 ntBASIC15.22■□□□□ 0.03
CNIH4Q9P003 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNIH4Q9P003 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNIH4Q9P003 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AC005237.2-201ENST00000434368 219 ntBASIC15.21■□□□□ 0.03
CNIH4Q9P003 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 AC010491.1-201ENST00000563101 2797 ntBASIC15.21■□□□□ 0.03
CNIH4Q9P003 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH4Q9P003 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH4Q9P003 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.21■□□□□ 0.02
CNIH4Q9P003 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.21■□□□□ 0.02
CNIH4Q9P003 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH4Q9P003 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH4Q9P003 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH4Q9P003 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CNIH4Q9P003 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms