Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NECTIN3Q9NQS3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 AC004967.1-201ENST00000453589 447 ntBASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 AC006538.1-201ENST00000567905 1585 ntBASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.61■□□□□ 0.09
NECTIN3Q9NQS3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AC016027.1-202ENST00000607927 1699 ntBASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 TFAMP1-201ENST00000412727 736 ntBASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 RARRES2P8-201ENST00000566335 367 ntBASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 MTHFR-217ENST00000641820 1569 ntBASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 HLA-A-202ENST00000376806 1854 ntBASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms