Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 PKD1P5-201ENST00000532415 10291 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 OR8S1-201ENST00000310194 1080 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC044860.1-202ENST00000559481 777 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC140912.1-201ENST00000577171 1054 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC024267.1-201ENST00000582320 895 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 AC060834.1-201ENST00000443027 2032 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 CU639417.3-201ENST00000624240 1404 ntBASIC16.78■□□□□ 0.28
HPS4Q9NQG7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HPS4Q9NQG7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 GGT4P-201ENST00000623672 1708 ntBASIC16.77■□□□□ 0.28
HPS4Q9NQG7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 SPDYE18-201ENST00000510091 1050 ntBASIC16.77■□□□□ 0.28
HPS4Q9NQG7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.77■□□□□ 0.28
HPS4Q9NQG7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.77■□□□□ 0.27
HPS4Q9NQG7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms