Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 AC005840.4-201ENST00000541242 2494 ntBASIC14.83□□□□□ -0.04
HMG20AQ9NP66 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMG20AQ9NP66 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC122714.2-201ENST00000502787 707 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 IGHV3-52-201ENST00000519770 353 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AL049597.2-201ENST00000565575 961 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC005336.2-201ENST00000593183 939 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC004817.3-201ENST00000602957 2129 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 AC015656.1-201ENST00000624209 3578 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.82□□□□□ -0.04
HMG20AQ9NP66 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HMG20AQ9NP66 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AL121672.3-201ENST00000608644 468 ntBASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AC019129.2-201ENST00000609837 1235 ntBASIC14.81□□□□□ -0.04
HMG20AQ9NP66 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMG20AQ9NP66 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms