Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 RPL37AP1-201ENST00000412502 279 ntBASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 MIR4321-201ENST00000592276 80 ntBASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 AL365330.1-201ENST00000607459 531 ntBASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 AL590560.3-201ENST00000623350 461 ntBASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AC100757.3-201ENST00000622361 1406 ntBASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 CETN4P-206ENST00000642099 2168 ntBASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 RNA5SP421-201ENST00000516864 134 ntBASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AL096865.1-201ENST00000606796 927 ntBASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAT1LQ9HCJ6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VAT1LQ9HCJ6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAT1LQ9HCJ6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.77■□□□□ 0.59
VAT1LQ9HCJ6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAT1LQ9HCJ6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VAT1LQ9HCJ6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 AC241585.1-201ENST00000433527 519 ntBASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 AC092364.2-202ENST00000597012 1073 ntBASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
VAT1LQ9HCJ6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms