Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 LINC01225-203ENST00000563550 1244 ntBASIC16.21■□□□□ 0.19
MRM3Q9HC36 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 AP000842.3-202ENST00000569238 1080 ntBASIC16.21■□□□□ 0.19
MRM3Q9HC36 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 MIR3687-2-201ENST00000577708 61 ntBASIC16.21■□□□□ 0.19
MRM3Q9HC36 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 MIR3687-1-201ENST00000614492 61 ntBASIC16.21■□□□□ 0.19
MRM3Q9HC36 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 C20orf181-201ENST00000623918 480 ntBASIC16.21■□□□□ 0.19
MRM3Q9HC36 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.21■□□□□ 0.19
MRM3Q9HC36 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRM3Q9HC36 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.21■□□□□ 0.18
MRM3Q9HC36 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRM3Q9HC36 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC022532.1-201ENST00000624563 1728 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 SPDYE11-202ENST00000450699 704 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 SPDYE9P-201ENST00000570642 692 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 SPDYE10P-202ENST00000612005 668 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 SPDYE8P-202ENST00000612377 668 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 PAUPAR-201ENST00000630360 2965 ntBASIC16.2■□□□□ 0.18
MRM3Q9HC36 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRM3Q9HC36 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
MRM3Q9HC36 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRM3Q9HC36 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRM3Q9HC36 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.19■□□□□ 0.18
MRM3Q9HC36 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRM3Q9HC36 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRM3Q9HC36 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.19■□□□□ 0.18
MRM3Q9HC36 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRM3Q9HC36 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms