Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 SSR4P1-203ENST00000599569 2260 ntBASIC20■□□□□ 0.79
UPF2Q9HAU5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20■□□□□ 0.79
UPF2Q9HAU5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 MIR3180-1-201ENST00000580374 94 ntBASIC19.99■□□□□ 0.79
UPF2Q9HAU5 MIR3180-3-201ENST00000584616 94 ntBASIC19.99■□□□□ 0.79
UPF2Q9HAU5 AC138894.3-201ENST00000603787 634 ntBASIC19.99■□□□□ 0.79
UPF2Q9HAU5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPF2Q9HAU5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 ARMC10P1-201ENST00000313754 855 ntBASIC19.98■□□□□ 0.79
UPF2Q9HAU5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.98■□□□□ 0.79
UPF2Q9HAU5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPF2Q9HAU5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 AC107918.2-201ENST00000530817 355 ntBASIC19.97■□□□□ 0.79
UPF2Q9HAU5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 AL805961.1-202ENST00000641562 540 ntBASIC19.97■□□□□ 0.79
UPF2Q9HAU5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 AC129492.6-201ENST00000611383 1305 ntBASIC19.97■□□□□ 0.79
UPF2Q9HAU5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.97■□□□□ 0.79
UPF2Q9HAU5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms