Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 PCDH8P1-201ENST00000428983 2773 ntBASIC19.08■□□□□ 0.65
RNF41Q9H4P4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 CYP4F24P-201ENST00000586049 1580 ntBASIC19.08■□□□□ 0.65
RNF41Q9H4P4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 MIR943-201ENST00000401286 94 ntBASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 DUX4L27-201ENST00000554796 1261 ntBASIC19.08■□□□□ 0.64
RNF41Q9H4P4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AL589739.1-201ENST00000607720 493 ntBASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AC073592.8-201ENST00000624126 511 ntBASIC19.08■□□□□ 0.64
RNF41Q9H4P4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AL136982.4-201ENST00000437689 1740 ntBASIC19.08■□□□□ 0.64
RNF41Q9H4P4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RNF41Q9H4P4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 AC124067.4-201ENST00000519691 2379 ntBASIC19.07■□□□□ 0.64
RNF41Q9H4P4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 SPDYE17-201ENST00000412399 783 ntBASIC19.07■□□□□ 0.64
RNF41Q9H4P4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 AL079307.3-201ENST00000556114 283 ntBASIC19.07■□□□□ 0.64
RNF41Q9H4P4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RNF41Q9H4P4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 SPDYE12P-201ENST00000618416 771 ntBASIC19.06■□□□□ 0.64
RNF41Q9H4P4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF41Q9H4P4 FO538757.1-201ENST00000623083 1397 ntBASIC19.06■□□□□ 0.64
RNF41Q9H4P4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms