Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 BRWD1P1-201ENST00000401091 371 ntBASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 FTH1P14-201ENST00000482930 551 ntBASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDH11YQ9BZA8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 HCG11-201ENST00000411553 5696 ntBASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 BAATP1-201ENST00000412284 1225 ntBASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC000095.1-201ENST00000603208 874 ntBASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC005252.2-201ENST00000624630 1141 ntBASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH11YQ9BZA8 AC020907.1-201ENST00000616460 1350 ntBASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 MSTO2P-201ENST00000314835 1709 ntBASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 AC007551.1-201ENST00000457394 519 ntBASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 PHKG1P2-201ENST00000457537 863 ntBASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 AC106760.1-201ENST00000508690 800 ntBASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH11YQ9BZA8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 AP001063.1-201ENST00000568332 529 ntBASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDH11YQ9BZA8 AL450472.2-201ENST00000603663 1156 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms