Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 IGHV3-42-201ENST00000520410 361 ntBASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 AC024267.1-201ENST00000582320 895 ntBASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SSBP3Q9BWW4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AC093214.1-201ENST00000511688 1107 ntBASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms