Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 U82695.1-201ENST00000635752 1889 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 CICP13-201ENST00000422015 2789 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 TNRC18P2-201ENST00000417666 2714 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 HMGA1P7-201ENST00000406908 502 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 AC105339.3-201ENST00000560043 636 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 MIR4515-201ENST00000584082 81 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 AL031055.1-201ENST00000606362 631 ntBASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 LINC02228-204ENST00000642115 2962 ntBASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 SSR4P1-203ENST00000599569 2260 ntBASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 UNC93B7-201ENST00000509439 705 ntBASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 AC005593.1-201ENST00000624894 515 ntBASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 AC008677.1-201ENST00000519230 1561 ntBASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HDHD3Q9BSH5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms