Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 AC073439.1-201ENST00000624121 1774 ntBASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 AC134407.2-201ENST00000625089 1978 ntBASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.93■□□□□ 0.46
BPIFA3Q9BQP9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 AC092474.2-201ENST00000424288 719 ntBASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 HNRNPDP1-201ENST00000439535 754 ntBASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PRELID1P1-202ENST00000567272 903 ntBASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 LINC01711-201ENST00000598340 967 ntBASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BPIFA3Q9BQP9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 AC092127.1-201ENST00000567093 3455 ntBASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BPIFA3Q9BQP9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BPIFA3Q9BQP9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms