Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 AC004987.2-201ENST00000395959 1148 ntBASIC17.31■□□□□ 0.36
ALPK3Q96L96 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 KRT18P66-201ENST00000452970 1269 ntBASIC17.31■□□□□ 0.36
ALPK3Q96L96 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 AP003171.2-201ENST00000528208 925 ntBASIC17.31■□□□□ 0.36
ALPK3Q96L96 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 AC013355.1-201ENST00000562625 723 ntBASIC17.31■□□□□ 0.36
ALPK3Q96L96 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.31■□□□□ 0.36
ALPK3Q96L96 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALPK3Q96L96 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 ACTBP8-201ENST00000403258 1108 ntBASIC17.3■□□□□ 0.36
ALPK3Q96L96 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 PRKXP1-201ENST00000561423 1122 ntBASIC17.3■□□□□ 0.36
ALPK3Q96L96 AL645939.5-201ENST00000606834 243 ntBASIC17.3■□□□□ 0.36
ALPK3Q96L96 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 YRDCP1-201ENST00000621419 643 ntBASIC17.3■□□□□ 0.36
ALPK3Q96L96 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.3■□□□□ 0.36
ALPK3Q96L96 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALPK3Q96L96 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 ACTG1P2-201ENST00000415776 1125 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 ACTG1P11-201ENST00000425411 1125 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC126915.1-201ENST00000522847 1038 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC234644.1-201ENST00000406065 370 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALPK3Q96L96 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC005622.1-201ENST00000636801 1703 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALPK3Q96L96 CROCCP2-202ENST00000412962 2773 ntBASIC17.29■□□□□ 0.36
ALPK3Q96L96 AC006480.2-201ENST00000609770 1337 ntBASIC17.28■□□□□ 0.36
ALPK3Q96L96 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 HLA-C-210ENST00000640219 976 ntBASIC17.28■□□□□ 0.36
ALPK3Q96L96 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms