Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SNX27Q96L92 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX27Q96L92 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX27Q96L92 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SNX27Q96L92 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.43■□□□□ 0.38
SNX27Q96L92 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SNX27Q96L92 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX27Q96L92 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX27Q96L92 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX27Q96L92 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX27Q96L92 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX27Q96L92 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNX27Q96L92 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.42■□□□□ 0.38
SNX27Q96L92 AC243562.2-201ENST00000561247 970 ntBASIC17.42■□□□□ 0.38
SNX27Q96L92 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.42■□□□□ 0.38
SNX27Q96L92 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX27Q96L92 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 AC004840.1-201ENST00000636359 365 ntBASIC17.42■□□□□ 0.38
SNX27Q96L92 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX27Q96L92 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SNX27Q96L92 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SNX27Q96L92 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX27Q96L92 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNX27Q96L92 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX27Q96L92 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX27Q96L92 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX27Q96L92 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SNX27Q96L92 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNX27Q96L92 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SNX27Q96L92 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNX27Q96L92 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX27Q96L92 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
SNX27Q96L92 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 AC004987.2-201ENST00000395959 1148 ntBASIC17.41■□□□□ 0.38
SNX27Q96L92 HIST3H2BA-201ENST00000436555 524 ntBASIC17.41■□□□□ 0.38
SNX27Q96L92 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 EEF1DP4-201ENST00000446006 880 ntBASIC17.41■□□□□ 0.38
SNX27Q96L92 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.41■□□□□ 0.38
SNX27Q96L92 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX27Q96L92 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 AC009118.2-201ENST00000613275 655 ntBASIC17.41■□□□□ 0.38
SNX27Q96L92 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNX27Q96L92 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX27Q96L92 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
SNX27Q96L92 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNX27Q96L92 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX27Q96L92 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNX27Q96L92 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX27Q96L92 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms