Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 AC105233.2-201ENST00000523697 349 ntBASIC17.17■□□□□ 0.34
TRIM11Q96F44 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 AF228730.5-201ENST00000530288 346 ntBASIC17.17■□□□□ 0.34
TRIM11Q96F44 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 AC099522.2-201ENST00000607001 744 ntBASIC17.17■□□□□ 0.34
TRIM11Q96F44 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM11Q96F44 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
TRIM11Q96F44 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 PAUPAR-201ENST00000630360 2965 ntBASIC17.16■□□□□ 0.34
TRIM11Q96F44 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 PKD1P5-201ENST00000532415 10291 ntBASIC17.16■□□□□ 0.34
TRIM11Q96F44 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 AC098859.1-201ENST00000502915 1238 ntBASIC17.16■□□□□ 0.34
TRIM11Q96F44 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM11Q96F44 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM11Q96F44 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM11Q96F44 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM11Q96F44 SLC25A1P1-201ENST00000528351 927 ntBASIC17.15■□□□□ 0.34
TRIM11Q96F44 FAM86C2P-203ENST00000528684 1004 ntBASIC17.15■□□□□ 0.34
TRIM11Q96F44 AC024267.1-201ENST00000582320 895 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms