Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 AC006001.1-201ENST00000325130 474 ntBASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 FNTAP2-201ENST00000430308 634 ntBASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 AC022137.2-201ENST00000503482 481 ntBASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 AL603756.1-201ENST00000606511 2163 ntBASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 FXNP2-201ENST00000411625 547 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AC025279.2-201ENST00000569730 653 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 MIR4741-201ENST00000579822 90 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 LINC01144-201ENST00000626198 1710 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 AC138028.6-201ENST00000616106 1482 ntBASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM43Q96BQ3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 LETM1P2-201ENST00000597330 2178 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ACKR1-201ENST00000368121 1240 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms