Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX1Q92499 HLA-V-201ENST00000429037 534 ntBASIC17.24■□□□□ 0.35
DDX1Q92499 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX1Q92499 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX1Q92499 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 SPDYE11-202ENST00000450699 704 ntBASIC17.24■□□□□ 0.35
DDX1Q92499 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX1Q92499 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX1Q92499 SPDYE9P-201ENST00000570642 692 ntBASIC17.24■□□□□ 0.35
DDX1Q92499 SPDYE10P-202ENST00000612005 668 ntBASIC17.24■□□□□ 0.35
DDX1Q92499 SPDYE8P-202ENST00000612377 668 ntBASIC17.24■□□□□ 0.35
DDX1Q92499 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX1Q92499 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX1Q92499 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX1Q92499 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX1Q92499 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
DDX1Q92499 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX1Q92499 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX1Q92499 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 AL359881.2-201ENST00000602973 570 ntBASIC17.23■□□□□ 0.35
DDX1Q92499 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
DDX1Q92499 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX1Q92499 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DDX1Q92499 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX1Q92499 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX1Q92499 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DDX1Q92499 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DDX1Q92499 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 AC011477.6-201ENST00000604980 1927 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX1Q92499 FAM220BP-201ENST00000377689 816 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX1Q92499 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 AC023141.5-201ENST00000458585 616 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 AC069335.1-201ENST00000489972 472 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX1Q92499 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.22■□□□□ 0.35
DDX1Q92499 KRT8P23-201ENST00000560090 1207 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX1Q92499 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX1Q92499 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 LINC00628-201ENST00000628516 1289 ntBASIC17.22■□□□□ 0.35
DDX1Q92499 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX1Q92499 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms