Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 GNRHR2-203ENST00000581100 1187 ntBASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 BNIP3P29-201ENST00000598302 571 ntBASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 AC011447.5-201ENST00000616168 564 ntBASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CASKIN1Q8WXD9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 C1QBPP1-201ENST00000400117 770 ntBASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 AC026410.3-201ENST00000514280 936 ntBASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 TDH-203ENST00000531764 1110 ntBASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 AC133552.6-201ENST00000613406 534 ntBASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASKIN1Q8WXD9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 AC018892.3-201ENST00000623986 2499 ntBASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC24.76■■□□□ 1.55
CASKIN1Q8WXD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 MSTO2P-201ENST00000314835 1709 ntBASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 RNF165-205ENST00000588679 2904 ntBASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASKIN1Q8WXD9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 AL133267.1-201ENST00000398220 340 ntBASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 AC107373.2-201ENST00000607735 490 ntBASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CASKIN1Q8WXD9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms