Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AC013268.4-201ENST00000637413 2228 ntBASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 AC093909.1-201ENST00000504731 1122 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 IGHV3-65-201ENST00000523210 341 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 AP001005.1-201ENST00000571755 1248 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 MPDU1-223ENST00000582151 728 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 MIR7706-201ENST00000613747 67 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 GPAA1P2-202ENST00000606848 1787 ntBASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.73□□□□□ -0.21
RTN4IP1Q8WWV3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AC092910.1-201ENST00000482027 1129 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SLC25A6P2-201ENST00000497974 877 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AC117500.6-201ENST00000624871 588 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms