Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 SART3-203ENST00000546611 1184 ntBASIC14.12□□□□□ -0.15
CCDC107Q8WV48 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 KRT8P49-201ENST00000604166 1432 ntBASIC14.12□□□□□ -0.15
CCDC107Q8WV48 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC107Q8WV48 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.11□□□□□ -0.15
CCDC107Q8WV48 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 AC139887.3-201ENST00000568585 713 ntBASIC14.11□□□□□ -0.15
CCDC107Q8WV48 MTDHP4-201ENST00000600287 670 ntBASIC14.11□□□□□ -0.15
CCDC107Q8WV48 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 AL139424.1-201ENST00000607572 797 ntBASIC14.11□□□□□ -0.15
CCDC107Q8WV48 AL355877.3-201ENST00000622820 899 ntBASIC14.11□□□□□ -0.15
CCDC107Q8WV48 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC107Q8WV48 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 AL009178.2-201ENST00000597278 2719 ntBASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TSPY19P-201ENST00000418461 509 ntBASIC14.1□□□□□ -0.15
CCDC107Q8WV48 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TSPY18P-201ENST00000441642 509 ntBASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 FGFR3P6-201ENST00000457012 610 ntBASIC14.1□□□□□ -0.15
CCDC107Q8WV48 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.1□□□□□ -0.15
CCDC107Q8WV48 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms