Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 FLJ38576-201ENST00000623820 2459 ntBASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
U2AF1L4Q8WU68 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.52■□□□□ 0.55
U2AF1L4Q8WU68 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
U2AF1L4Q8WU68 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.52■□□□□ 0.55
U2AF1L4Q8WU68 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
U2AF1L4Q8WU68 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.52■□□□□ 0.55
U2AF1L4Q8WU68 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AL118508.1-201ENST00000613502 2345 ntBASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AC073439.1-201ENST00000624121 1774 ntBASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AC098850.1-201ENST00000419919 790 ntBASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 WFDC1-204ENST00000613603 549 ntBASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
U2AF1L4Q8WU68 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 UBALD1-205ENST00000590891 2641 ntBASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AL583810.1-201ENST00000553344 1045 ntBASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AC015936.2-201ENST00000593177 259 ntBASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AC093726.1-201ENST00000608064 963 ntBASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AC092068.3-201ENST00000587894 2016 ntBASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
U2AF1L4Q8WU68 PCDHA14-201ENST00000506751 2298 ntBASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.49■□□□□ 0.55
U2AF1L4Q8WU68 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms