Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.69□□□□□ -0.7
ALMS1Q8TCU4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 MIR769-201ENST00000390225 118 ntBASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AC018635.2-201ENST00000608625 364 ntBASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AC011491.1-203ENST00000637688 543 ntBASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC10.68□□□□□ -0.7
ALMS1Q8TCU4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 HOMER2P2-201ENST00000451621 847 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AC126915.1-201ENST00000522847 1038 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 CD8B2-202ENST00000417670 633 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AP000346.4-201ENST00000614827 381 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AL133373.2-201ENST00000623187 2828 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms