Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CNN2P11-201ENST00000429351 262 ntBASIC16.73■□□□□ 0.27
PAF1Q8N7H5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 DNAJB3-202ENST00000449667 1266 ntBASIC16.73■□□□□ 0.27
PAF1Q8N7H5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 AC004835.2-201ENST00000603762 682 ntBASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 AC092171.3-201ENST00000610122 2651 ntBASIC16.73■□□□□ 0.27
PAF1Q8N7H5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAF1Q8N7H5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.72■□□□□ 0.27
PAF1Q8N7H5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 FLJ38576-201ENST00000623820 2459 ntBASIC16.72■□□□□ 0.27
PAF1Q8N7H5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AL592309.1-201ENST00000443127 649 ntBASIC16.72■□□□□ 0.27
PAF1Q8N7H5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 AL512652.2-201ENST00000625156 1716 ntBASIC16.72■□□□□ 0.27
PAF1Q8N7H5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAF1Q8N7H5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AL031731.1-201ENST00000642131 2094 ntBASIC16.71■□□□□ 0.27
PAF1Q8N7H5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms